Software from our lab

These are programs that are written to accompany specific papers. In addition, see the programs (or packages)

Two locus iteration of gene frequencies, linkage disequilibrium with two linked interacting loci

C program that reads from a file a 3x3 blank-separated matrix of fitnesses for two alleles at two loci, plus recombination fraction and starting gene frequencies and linkage disequilibrium, and allows you to iterate generations and see whether mean fitnesses are increasing or decreasing in each generation

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FORTRAN II program for agglomerative clustering (1964 or 1965, University of Chicago)

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FORTRAN II program for 8-state Camin-Sokal parsimony (1966, University of Chicago)

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FORTRAN IV programs for simulation of the evolution of recombination (Felsenstein, 1974; Felsenstein and Yokoyama, 1976)

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Speciation model programs

Pascal programs for the 1981 paper in Evolution: "Skepticism towards Santa Rosalia, or Why are there so few kinds of animals?"

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